我们研究了有限空间中值的静止随机过程的最佳运输。为了反映潜在流程的实向性,我们限制了对固定联轴器的关注,也称为联系。由此产生的最佳连接问题捕获感兴趣过程的长期平均行为的差异。我们介绍了最优联接的估算和最佳的加入成本,我们建立了温和条件下估算器的一致性。此外,在更强的混合假设下,我们为估计的最佳连接成本建立有限样本误差速率,其延伸了IID案件中的最佳已知结果。最后,我们将一致性和速率分析扩展到最佳加入问题的熵惩罚版本。
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We introduce and analyze NetOTC, a procedure for the comparison and soft alignment of weighted networks. Given two networks and a cost function relating their vertices, NetOTC finds an appropriate coupling of their associated random walks having minimum expected cost. The minimizing cost provides a numerical measure of the difference between the networks, while the optimal transport plan itself provides interpretable, probabilistic alignments of the vertices and edges of the two networks. The cost function employed can be based, for example, on vertex degrees, externally defined features, or Euclidean embeddings. Coupling of the full random walks, rather than their stationary distributions, ensures that NetOTC captures local and global information about the given networks. NetOTC applies to networks of different size and structure, and does not the require specification of free parameters. NetOTC respects edges, in the sense that vertex pairs in the given networks are aligned with positive probability only if they are adjacent in the given networks. We investigate a number of theoretical properties of NetOTC that support its use, including metric properties of the minimizing cost and its connection with short- and long-run average cost. In addition, we introduce a new notion of factor for weighted networks, and establish a close connection between factors and NetOTC. Complementing the theory, we present simulations and numerical experiments showing that NetOTC is competitive with, and sometimes superior to, other optimal transport-based network comparison methods in the literature. In particular, NetOTC shows promise in identifying isomorphic networks using a local (degree-based) cost function.
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在许多科学应用中出现了从一组共同样本中获得两种(或更多)类型的测量的数据集。此类数据的探索性分析中的一个常见问题是识别有密切相关的不同数据类型的特征组。 Bimodule是来自两种数据类型的特征集的一对(A,B),因此A和B中的特征之间的汇总相关很大。如果A与B中的特征显着相关的特征集合,则BIMODULE(A,B)是稳定的,反之亦然。在本文中,我们提出并研究了基于迭代测试的程序(BSP),以识别Bi-View数据中稳定的双模型。我们进行了一项彻底的模拟研究,以评估BSP的性能,并使用GTEX项目的最新数据提出了表达定量性状基因座(EQTL)分析问题的扩展应用。此外,我们将BSP应用于气候数据,以确定北美地区年温度变化影响降水的区域。
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The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known about the common practice as well as bottlenecks faced by the community in tackling the research questions posed. To shed light on the status quo of algorithm development in the specific field of biomedical imaging analysis, we designed an international survey that was issued to all participants of challenges conducted in conjunction with the IEEE ISBI 2021 and MICCAI 2021 conferences (80 competitions in total). The survey covered participants' expertise and working environments, their chosen strategies, as well as algorithm characteristics. A median of 72% challenge participants took part in the survey. According to our results, knowledge exchange was the primary incentive (70%) for participation, while the reception of prize money played only a minor role (16%). While a median of 80 working hours was spent on method development, a large portion of participants stated that they did not have enough time for method development (32%). 25% perceived the infrastructure to be a bottleneck. Overall, 94% of all solutions were deep learning-based. Of these, 84% were based on standard architectures. 43% of the respondents reported that the data samples (e.g., images) were too large to be processed at once. This was most commonly addressed by patch-based training (69%), downsampling (37%), and solving 3D analysis tasks as a series of 2D tasks. K-fold cross-validation on the training set was performed by only 37% of the participants and only 50% of the participants performed ensembling based on multiple identical models (61%) or heterogeneous models (39%). 48% of the respondents applied postprocessing steps.
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We present a retrospective on the state of Embodied AI research. Our analysis focuses on 13 challenges presented at the Embodied AI Workshop at CVPR. These challenges are grouped into three themes: (1) visual navigation, (2) rearrangement, and (3) embodied vision-and-language. We discuss the dominant datasets within each theme, evaluation metrics for the challenges, and the performance of state-of-the-art models. We highlight commonalities between top approaches to the challenges and identify potential future directions for Embodied AI research.
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通用数据模型解决了标准化电子健康记录(EHR)数据的许多挑战,但无法将其集成深度表型所需的资源。开放的生物学和生物医学本体论(OBO)铸造本体论提供了可用于生物学知识的语义计算表示,并能够整合多种生物医学数据。但是,将EHR数据映射到OBO Foundry本体论需要大量的手动策展和域专业知识。我们介绍了一个框架,用于将观察性医学成果合作伙伴关系(OMOP)标准词汇介绍给OBO铸造本体。使用此框架,我们制作了92,367条条件,8,615种药物成分和10,673个测量结果的映射。域专家验证了映射准确性,并且在24家医院进行检查时,映射覆盖了99%的条件和药物成分和68%的测量结果。最后,我们证明OMOP2OBO映射可以帮助系统地识别可能受益于基因检测的未诊断罕见病患者。
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贝叶斯优化(BO)方法试图找到目标功能的全球最佳功能,这些功能仅作为黑盒或昂贵的评估。这样的方法为目标函数构建了替代模型,从而量化了通过贝叶斯推论的替代物中的不确定性。客观评估是通过在每个步骤中最大化采集函数来依次确定的。但是,由于采集函数的非转换性,尤其是在批处理贝叶斯优化的情况下,该辅助优化问题可能是高度不平凡的,因此可以解决。在这项工作中,我们将批处理重新定义为在概率措施空间上的优化问题。我们基于多点预期改进来构建一个新的采集函数,该功能是概率度量空间的凸面。解决此“内部”优化问题的实用方案自然会作为该目标函数的梯度流。我们证明了这种新方法对不同基准函数的功效,并与最先进的批次BO方法进行了比较。
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在这项工作中,我们提出了一个框架,用于部署的无人驾驶汽车(UAV)的便携式接入点(PAP),以服务于一组接地节点(GNS)。除PAP和GNS外,该系统还由安装在人造结构上的一组智能反射表面(IRS)组成,以增加每焦耳的能源消耗的钻头数量,这些能量消耗被测量为全球能源效率(GEE)。 PAP的GEE轨迹是通过考虑UAV推进能量消耗和PAP电池的PEUKERT效应来设计的,PAP电池代表了精确的电池放电曲线作为无人机功耗概况的非线性功能。 GEE轨迹设计问题分为两个阶段:在第一个阶段,使用多层圆形填料方法找到了PAP的路径和可行位置,并使用替代方案计算所需的IRS相移值优化方法考虑了IRS元素的幅度和相位响应之间的相互依赖性;在第二阶段,使用新型的多轨迹设计算法计算PAP飞行速度和用户调度。数值评估表明:忽略Peukert效应高估了PAP的可用飞行时间;一定的阈值后,增加电池尺寸会减少PAP的可用飞行时间;与其他基线场景相比,IRS模块的存在改善了系统的GEE。与使用顺序凸编程和Dinkelbach算法的组合开发的单圈轨迹相比,多圈轨迹可节省更多的能量。
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台湾对全球碎片流的敏感性和死亡人数最高。台湾现有的碎屑流警告系统,该系统使用降雨量的时间加权度量,当该措施超过预定义的阈值时,会导致警报。但是,该系统会产生许多错误的警报,并错过了实际碎屑流的很大一部分。为了改善该系统,我们实施了五个机器学习模型,以输入历史降雨数据并预测是否会在选定的时间内发生碎屑流。我们发现,随机的森林模型在五个模型中表现最好,并优于台湾现有系统。此外,我们确定了与碎屑流的发生密切相关的降雨轨迹,并探索了缺失碎屑流的风险与频繁的虚假警报之间的权衡。这些结果表明,仅在小时降雨数据中训练的机器学习模型的潜力可以挽救生命,同时减少虚假警报。
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减少甲烷排放对于缓解全球变暖至关重要。为了将甲烷排放归因于其来源,有必要综合的甲烷源基础设施数据集。深入学习远程感知的图像的最新进展有可能识别甲烷源的位置和特征,但是缺乏公开可用的数据,可以使机器学习研究人员和从业人员能够构建自动映射方法。为了帮助填补这一空白,我们在美国构建了一个称为Meter-ML的多传感器数据集,该数据集包含86,625个地理参考的NAIP,Sentinel-1和Sentinel-2图像,并在美国标记为有甲烷源设施,包括甲烷源设施,包括集中动物喂养操作,,,,,,,包括浓缩动物喂养操作,煤矿,垃圾填埋场,天然气加工厂,炼油厂和石油末端以及废水处理厂。我们尝试各种模型,以利用不同的空间分辨率,空间足迹,图像产品和光谱带。我们发现,我们的最佳模型在确定浓缩动物喂养操作的精确召回曲线下达到了一个面积,在专家标签的测试集上,用于识别浓缩动物饲养操作,用于油炼油厂和石油末端0.821,这表明有可能进行大规模映射。我们在https://stanfordmlgroup.github.io/projects/meter-ml/上免费提供仪表-ML,以支持自动化甲烷源映射的未来工作。
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